Package: DQAstats 0.3.5

Lorenz A. Kapsner

DQAstats: Core Functions for Data Quality Assessment

Perform data quality assessment ('DQA') of electronic health records ('EHR'). Publication: Kapsner et al. (2021) <doi:10.1055/s-0041-1733847>.

Authors:Lorenz A. Kapsner [cre, aut], Jonathan M. Mang [aut], Helene Köster [ctb], MIRACUM - Medical Informatics in Research and Care in University Medicine [fnd], Universitätsklinikum Erlangen [cph]

DQAstats_0.3.5.tar.gz
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DQAstats.pdf |DQAstats.html✨
DQAstats/json (API)

# Install 'DQAstats' in R:
install.packages('DQAstats', repos = c('https://miracum.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/miracum/dqa-dqastats/issues

Uses libs:
  • openjdk– OpenJDK Java runtime, using Hotspot JIT

On CRAN:

data-quality

6.17 score 7 stars 1 packages 4 scripts 538 downloads 24 exports 106 dependencies

Last updated 19 days agofrom:56fee588b4. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 04 2024
R-4.5-winOKNov 04 2024
R-4.5-linuxOKNov 04 2024
R-4.4-winOKNov 04 2024
R-4.4-macOKNov 04 2024
R-4.3-winOKNov 04 2024
R-4.3-macOKNov 04 2024

Exports:atemp_plausi_resultscheck_date_restriction_requirementscompletenesscreate_helper_varscreate_markdowncreate_pdf_reportdata_loadingdescriptive_resultsdifference_checksdqaetl_checksexport_aggregatedformat_value_conformance_resultsgenerate_datamapget_atemp_plausisis_latex_installedparallelread_mdrreduce_cattest_csvtime_compareuniq_plausi_resultsvalue_conformancevalue_conformance_checks

Dependencies:backportsbase64encbitbit64blobbslibcachemcheckmatecleaRcliclustercodetoolscolorspaceconfigcpp11data.tableDBIdigestDIZtoolsDIZutilsevaluatefansifarverfastmapfontawesomeforeignFormulafsfuturefuture.applygenericsggplot2globalsglueGPArotationgridExtragtablehighrHmischmshtmlTablehtmltoolshtmlwidgetsisobandjquerylibjsonlitekableExtraknitrlabelinglaterlatticelifecyclelistenvloggerlubridatemagrittrMASSMatrixmemoisemgcvmimemnormtmunsellnlmennetparallellyparsedatepillarpkgconfigplogrprocessxpspsychquartoR.methodsS3R.ooR.utilsR6rappdirsRColorBrewerRcpprJavaRJDBCRJSONIOrlangrmarkdownrpartRPostgresrstudioapisassscalesstringistringrsvglitesystemfontstibbletimechangetinytexutf8vctrsviridisviridisLitewithrxfunxml2yaml

DQAstats2SHIPdataset

Rendered fromDQAstats2SHIPdataset.qmdusingquarto::htmlon Nov 04 2024.

Last update: 2024-06-03
Started: 2024-06-03

Readme and manuals

Help Manual

Help pageTopics
Time filtering of data.table or sql-strings.apply_time_restriciton
atemp_plausi_results helper functionatemp_plausi_results
Checking the mdr integrity for time restrictionscheck_date_restriction_requirements
completeness helper functioncompleteness
create_helper_vars helper functioncreate_helper_vars
create_markdown helper functioncreate_markdown
create_pdf_report helper functioncreate_pdf_report
data_loading helper functiondata_loading
descriptive_results helper functiondescriptive_results
difference_checks helper functiondifference_checks
Perform Data Quality Assessment of Electronic Health Records.dqa
etl_checks helper functionetl_checks
Export results to csv/zip file.export_aggregated
format_value_conformance_results helper functionformat_value_conformance_results
generate_datamap helper functiongenerate_datamap
get_atemp_plausis helper functionget_atemp_plausis
Get a formatted string containing start and end time of the date restriction applied to the data.get_restricting_date_info
Checks if there is a LaTeX installation availableis_latex_installed
load_csv helper functionload_csv
load_database helper functionload_database
load_sqls helper functionload_sqls
parallel helper functionparallel
read_mdr helper functionread_mdr
reduce_cat helper functionreduce_cat
test_csv helper functiontest_csv
time_compare helper functiontime_compare
uniq_plausi_results helper functionuniq_plausi_results
value_conformance helper functionvalue_conformance
value_conformance_checks helper functionvalue_conformance_checks